Protein ZmEREB146 | |
---|---|
Information | |
TF Name: | ZmEREB146 |
Species: | Maize |
TF Family: | AP2/ERF-AP2 |
Gene Name(Synonym): | ZmERFAP2_88 |
Uniprot ID: | K7V1E8 |
Subgenome: | 2 |
ZmEREB146 is a protein in the AP2/ERF-AP2 family.
Overview of domains present in v5 transcripts | |
---|---|
PF00847 | |
Zm00001eb343790_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d009573 | DAPseq | sequence | fimo | position | |
Zm00001d009573 | DAPseq | sequence | fimo | position | |
Zm00001d009573 | ChIPseq | sequence | fimo | position | |
Zm00001d009573 | PChIPseq | sequence | fimo | position |
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00847 |
|
PF00847 |
|
Hover here to show all domains |
ATGGCGATTGGAGCAGCGGATGATG...
ATGGCGATTGGAGCAGCGGATGATGGTTCGCACCAGCAGCTTGCTGACCAGGCCGCAAACATCCTCGAGAATGTGTGGGCTGCCATCATAGGCTCCGGAACCCCGGCGGCGCCTTCGACGACCGAGATGAGGCCGCCGGAGGCGATCTTGGAGAGGCTTCCCAGCCTGGGGAGGTGGATTTCCATGGGAGCCGAGGAGTGGGACGAGCTCCTGCTCAATGGCGCGGCGCTCGCGTCGGACGCCGCCGCCTCCGGCGAGTTGCTCATCGCTGCCTCGCCGGCGGCGAGCCAAGAAGCAGACCGGCAGCACGGCCACCGGGCCAGCTGCAGCTCCAAGGCGGCGGCGGCGTGCAAGAGCTACCGGGGCGTGAGGCGGCGGCCGTGGGGCAAGTTTGCGGCGGAGATACGGGACACGCGGCGGAAAGGCGCGCGGGTGTGGCTGGGCACGTTCGCGACCGCCGAGGACGCCGCGCTGGCCTACGACAAGGCGGCGCTGCGCATGCGCGGCCCCCGCGCGCACCTCAACTTCCCGCTCGACGTGGTGCAGCGCGAACTGGCGGCGGCCGCGGCCCGGGACGACGGCTGCGCCGAGACGGCCCGCGTGTTGCGCCGGAAGAGGAGGGTAGCTAATCACGATGATTCTGCTGTTGGTACAAGAAGCCATCATCGGAGTGTGATGCCGGCAACTGGCCGTGATCCGACTCCGACCATGGTGTCGTTCGCTTGTGCGAGGAAAGATCAGGGGACGCCGCCGGCAATGATGCAAGGACGCTCGACCAGTGATCCAGGAGCAGTGATCGAGTTCGAGGACATCGGTGGCGAGTACTGGGACTACTTGTTCACATAA
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEFEDIGGEYWDYLFT
CAGGCAGCAATGGCGATTGGAGCAG...
CAGGCAGCAATGGCGATTGGAGCAGCGGATGATGGTTCGCACCAGCAGCTTGCTGACCAGGCCGCAAACATCCTCGAGAATGTGTGGGCTGCCATCATAGGCTCCGGAACCCCGGCGGCGCCTTCGACGACCGAGATGAGGCCGCCGGAGGCGATCTTGGAGAGGCTTCCCAGCCTGGGGAGGTGGATTTCCATGGGAGCCGAGGAGTGGGACGAGCTCCTGCTCAATGGCGCGGCGCTCGCGTCGGACGCCGCCGCCTCCGGCGAGTTGCTCATCGCTGCCTCGCCGGCGGCGAGCCAAGAAGCAGACCGGCAGCACGGCCACCGGGCCAGCTGCAGCTCCAAGGCGGCGGCGGCGTGCAAGAGCTACCGGGGCGTGAGGCGGCGGCCGTGGGGCAAGTTTGCGGCGGAGATACGGGACACGCGGCGGAAAGGCGCGCGGGTGTGGCTGGGCACGTTCGCGACCGCCGAGGACGCCGCGCTGGCCTACGACAAGGCGGCGCTGCGCATGCGCGGCCCCCGCGCGCACCTCAACTTCCCGCTCGACGTGGTGCAGCGCGAACTGGCGGCGGCCGCGGCCCGGGACGACGGCTGCGCCGAGACGGCCCGCGTGTTGCGCCGGAAGAGGAGGGTAGCTAATCACGATGATTCTGCTGTTGGTACAAGAAGCCATCATCGGAGTGTGATGCCGGCAACTGGCCGTGATCCGACTCCGACCATGGTGTCGTTCGCTTGTGCGAGGAAAGATCAGGGGACGCCGCCGGCAATGATGCAAGGACGCTCGACCAGTGATCCAGGAGCAGTGATCGAGTTCGAGGACATCGGTGGCGAGTACTGGGACTACTTGTTCACATAA
MAIGAADDGSHQQLADQAANILENVWAAIIGSGTPAAPSTTEMRPPEAILERLPSLGRWISMGAEEWDELLLNGAALASD
AAASGELLIAASPAASQEADRQHGHRASCSSKAAAACKSYRGVRRRPWGKFAAEIRDTRRKGARVWLGTFATAEDAALAY
DKAALRMRGPRAHLNFPLDVVQRELAAAAARDDGCAETARVLRRKRRVANHDDSAVGTRSHHRSVMPATGRDPTPTMVSF
ACARKDQGTPPAMMQGRSTSDPGAVIEGDVLASCG
ATGGCGATTGGAGCAGCGGATGATG...
ATGGCGATTGGAGCAGCGGATGATGGTTCGCACCAGCAGCTTGCTGACCAGGCCGCAAACATCCTCGAGAATGTGTGGGCTGCCATCATAGGCTCCGGAACCCCGGCGGCGCCTTCGACGACCGAGATGAGGCCGCCGGAGGCGATCTTGGAGAGGCTTCCCAGCCTGGGGAGGTGGATTTCCATGGGAGCCGAGGAGTGGGACGAGCTCCTGCTCAATGGCGCGGCGCTCGCGTCGGACGCCGCCGCCTCCGGCGAGTTGCTCATCGCTGCCTCGCCGGCGGCGAGCCAAGAAGCAGACCGGCAGCACGGCCACCGGGCCAGCTGCAGCTCCAAGGCGGCGGCGGCGTGCAAGAGCTACCGGGGCGTGAGGCGGCGGCCGTGGGGCAAGTTTGCGGCGGAGATACGGGACACGCGGCGGAAAGGCGCGCGGGTGTGGCTGGGCACGTTCGCGACCGCCGAGGACGCCGCGCTGGCCTACGACAAGGCGGCGCTGCGCATGCGCGGCCCCCGCGCGCACCTCAACTTCCCGCTCGACGTGGTGCAGCGCGAACTGGCGGCGGCCGCGGCCCGGGACGACGGCTGCGCCGAGACGGCCCGCGTGTTGCGCCGGAAGAGGAGGGTAGCTAATCACGATGATTCTGCTGTTGGTACAAGAAGCCATCATCGGAGTGTGATGCCGGCAACTGGCCGTGATCCGACTCCGACCATGGTGTCGTTCGCTTGTGCGAGGAAAGATCAGGGGACGCCGCCGGCAATGATGCAAGGACGCTCGACCAGTGATCCAGGAGCAGTGATCGAGGGAGATGTCTTGGCGTCCTGTGGGTGA
Copyright © 2023 Grassius.org | Last updated: 2023-06-26